PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 349aa    MW: 40245.9 Da    PI: 8.5686
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59553122PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.41.7e-361382292102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+ye+++d+e++ ++swsen +sf+v++++efak +LpkyFkhsnf+SF+RQLn+YgF+kv++++         weF+++ F+ gkk+ll++i+
     Ahy011400 138 FLRKTYEMVDDPETDPIVSWSENRDSFIVWESHEFAKVLLPKYFKHSNFSSFIRQLNTYGFRKVDSDR---------WEFANEGFQGGKKHLLKNIR 225
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
     Ahy011400 226 RRSK 229
                   **87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004154.7E-60134227IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.101.5E-38134227IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467859.11E-36134227IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004473.4E-32138227IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.7E-20138161IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.7E-20176188IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340177201IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.7E-20189201IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
XSHHYLYSTL NSNPSKTDKP QFQPTSKMVL LAHAGSGGGQ ACSPPQFNKA IAEEKPVEMV  60
RVKSEQVTSS CRFLQQNDDV SSDESDKKKS NSEVTEEEEP RVKEEVADDG AVNVSSSSSS  120
VELPKPMEGL NEAGPPPFLR KTYEMVDDPE TDPIVSWSEN RDSFIVWESH EFAKVLLPKY  180
FKHSNFSSFI RQLNTYGFRK VDSDRWEFAN EGFQGGKKHL LKNIRRRSKY NKLHQGAFID  240
PAKPCLEAEV EKLKEDQNIL KLEILKLRQQ QESSHVHISS VQDRIQNVQT KQYQMIYFLT  300
RMARKPTFME QLLQKIKRKR ELDGTDMLKR RRLLEPTPSV DYRCQQGHX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B4e-251102271129Heat shock factor protein 1
5d5v_B4e-251102271129Heat shock factor protein 1
5d5v_D4e-251102271129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317331RKRELDGTDMLKRRR
2328332KRRRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015973603.10.0PREDICTED: heat stress transcription factor A-2-like
SwissprotO809822e-81HSFA2_ARATH; Heat stress transcription factor A-2
TrEMBLA0A0B2PBI11e-132A0A0B2PBI1_GLYSO; Heat stress transcription factor A-2
TrEMBLI1LY111e-132I1LY11_SOYBN; Uncharacterized protein
STRINGGLYMA13G16510.11e-131(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.16e-82heat shock transcription factor A2